en 1998–99 Czech 2. Liga

2. česká fotbalová liga
Season	1998–1999
Champions	Bohemians Prague
Promoted	Bohemians Prague; České Budějovice
Relegated	Přerov; Česká Lípa
Matches played	240
Goals scored	574 (2.39 per match)
Top goalscorer	Patrik Holomek (18)
Average attendance	1,471
	← 1997–98 1999–2000 →

The 1998–99 Czech 2. Liga was the sixth season of the 2. česká fotbalová liga, the second tier of the Czech football league.

League standings

Pos	Team	Pld	W	D	L	GF	GA	GD	Pts	Promotion or relegation
1	Bohemians Prague (C, P)	30	23	4	3	62	12	+50	73	Promotion to 1999–2000 1. Liga
2	České Budějovice (P)	30	22	6	2	65	18	+47	72	Promotion to 1999–2000 1. Liga
3	Synot	30	20	7	3	64	26	+38	67
4	Most	30	16	8	6	47	31	+16	56
5	Vítkovice	30	13	7	10	40	37	+3	46
6	NH Ostrava	30	10	10	10	28	28	0	40
7	Lázně Bohdaneč	30	9	10	11	25	32	−7	37
8	Zlín	30	10	6	14	26	33	−7	36
9	Frýdek-Místek	30	9	7	14	33	40	−7	34
10	Mladá Boleslav	30	9	7	14	23	30	−7	34
11	Poštorná	30	9	7	14	31	41	−10	34
12	Chrudim (R)	30	10	4	16	30	48	−18	34	Relegation to 1999–2000 ČFL
13	Třinec	30	8	6	16	32	52	−20	30
14	Prostějov	30	8	5	17	24	39	−15	29
15	Přerov (R)	30	7	5	18	27	56	−29	26	Relegation to 1999–2000 MSFL^[a]
16	Česká Lípa (R)	30	4	7	19	17	51	−34	19	Relegation to 1999–2000 ČFL

Source: RSSSF
Rules for classification: 1) points; 2) goal difference; 3) number of goals scored.
(C) Champions; (P) Promoted; (R) Relegated
Notes:

^ Přerov subsequently withdrew and did not compete in the following season's MSFL.^[1]

Rank	Scorer	Club	Goals
1	Patrik Holomek	Synot	18
2	Ladislav Fujdiar	České Budějovice	16
2	Jiří Povišer	České Budějovice	16
4	Tomáš Janda	České Budějovice	12
5	Lubomír Langer	Vítkovice	11
5	Luděk Zdráhal	Bohemians Prague	11